Your right, back in the return it goes, looks like the only option is to delay power to the ATO for 5-10 minutes Until level stabilizes.Yes you are logically correct that the water evaporated on the whole system. But you can try this now actually.
Turned off your ATO,
Take a cup of water out of your DT(evaporation), then watch your sump. The only water level change should be the return chamber only.
Then you can pour it back on your DT and the water levels should normalize
Thanks for the help!