Cyano problem, need help

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also, i dont know if this is a clue, but in the morning before the lights are up, there is only a little coloration on the sand bed.. the sand looks mostly clean with some red/purple spots. As the aquarium lights intensify during the day, then the brown mat starts to intensify




I think I have amphidinium dino? All this time I thoguth it was cyano.


View attachment 4543605
Other mat forming organisms are also increasing with the photoperiod so it's not a 100% certain ID but Amphidinium is certainly a possibility as some of them apparently create less mucus and like to go a bit deeper into the substrate.
 
This is like a mat of brown/red.. The previous battle I had with dinos was very obvious, gooe everywhere and strings up.

Unless you're saying I have a different dinos that isn't like the previous one I had. Cant wait for the scope to come...
I was tempted to think dinoflagellates because the only time that I observed cyanobacteria that were not green or red/purple was under sever nitrogen depletion which you don’t have.

Good luck with your microscopy investigation.
 
@125mph finally found an image. I knew I had seen this stuff before:

https://www.reef2reef.com/threads/microscopy-thread.1138845/post-14467504
[...]
IMG_7555.JPG

IMG_7544.JPG
Amphidinium (or Testudodinium which is hard to differentiate somemtimes) can create this slime-less substrate coverage
 
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I have a bad GHA problem as well, been battling that for a while too..

Do you think I could stop dosing nitrate and be okay? I had dinos last year because my phosphate and nitrates crashed to zero and took about a month to get rid of the dinos. Thats why I'm very afraid of nitrates dropping to zero... If i dont dose, my nitrate last time went to 0 and I quickly dosed it back (phosphate was still at 0.03 ) so I think thats why I didnt get dinos again this time,.
I would stop and not be concerned with low no3. Clean aquariums never suffer algae problems. Manual removal and vigorous maintenance is all that is needed…
 
I have Cyano in my DT right now that is Rust Colored. Not sure why but it's definitely Cyano. I just checked some under my Microscope and it matches the image. I would think your problem is the same. I have been dosing Microbacter-7 and it's seems to be slowing down
 
I have been battling cyano for about 9 months and not sure what to do.

- Ran chemi-clean 4 times, and it keeps coming back
- Ran coral snow + cyanoclean and it did nothing

My nitrates are around 5ppm and phosphate around .04ppm, but phosphate stays stable and nitrate drops by 1ppm per day and i dose another 3-4ppm every few days to keep it from crashing. AI thinks its an imbalance of nitrates dropping too fast and has me dosing 1ppm per day to keep it stable. Trying that now.

Running a skimmer, turb scrubber, and fleece roller (reefmat).

Tried lots of water changes, cleaning sand bed. Nothing works

IMG_5215.jpeg
I'm guessing dinos. Your microscope will help you ID what this is, then you'll know what your options are for how to proceed! Looks like you picked a nice scope!
 
I had cyano several times, including the kind tht disappears over night. I always had low nitrates and phosphates, and tried all kinds of things to raise them, including. dosing nitrates, phosphates, and vinegar. Nothing worked, until I stopped all my efforts and returned to my regular maintenance interval and nothing else. The cyano eventually disappeared, but it took several months.
 
Have you run your skimmer dryer to let nitrates raise a bit?
Curious what test kits are you using?
 
AI thinks its an imbalance of nitrates dropping too fast and has me dosing 1ppm per day to keep it stable. Trying that now.
🤦‍♂️

I have been battling cyano for about 9 months and not sure what to do.

- Ran chemi-clean 4 times, and it keeps coming back
- Ran coral snow + cyanoclean and it did nothing

My nitrates are around 5ppm and phosphate around .04ppm, but phosphate stays stable and nitrate drops by 1ppm per day and i dose another 3-4ppm every few days to keep it from crashing. AI thinks its an imbalance of nitrates dropping too fast and has me dosing 1ppm per day to keep it stable. Trying that now.

Running a skimmer, turb scrubber, and fleece roller (reefmat).

Tried lots of water changes, cleaning sand bed. Nothing works
Cyano is a tough one. IMO "nutrients" has a much wider meaning to them than to other algae....not just N & P.

What do you have for flow?

How well does your skimmer appear to be working? How would you describe the skimmate?

What does "turb scrubber" mean? (Turf scrubber? If so, seems contrary to your tank's needs IMO. How does it seem to be running? Describe its production.)

Mechanical filtration like a reef mat should be unnecessary under good reefing conditions. Does it seem to be necessary in your tank or does it not seem to do much?

How are your corals doing? Anything corals warring or declining?
 
Got the microscope today, finally. Was tinkering with it.

I did start dosing 1.5ml/day silicates starting last week when suspected dinos. Its actually helped a lot but the rust brown is still there, just not as heavy.

IMG_5360.jpeg


IMG_5361.jpeg
 
Have you run your skimmer dryer to let nitrates raise a bit?
Curious what test kits are you using?

Using hanna.

Skimmer is a bk deluxe. Its dark wet skimmate. Yes i think i might turn it off to let nitrates rise. It drop to near zero just this week
 
🤦‍♂️


Cyano is a tough one. IMO "nutrients" has a much wider meaning to them than to other algae....not just N & P.

What do you have for flow?

How well does your skimmer appear to be working? How would you describe the skimmate?

What does "turb scrubber" mean? (Turf scrubber? If so, seems contrary to your tank's needs IMO. How does it seem to be running? Describe its production.)

Mechanical filtration like a reef mat should be unnecessary under good reefing conditions. Does it seem to be necessary in your tank or does it not seem to do much?

How are your corals doing? Anything corals warring or declining?

Did the reefmat cause i hate filter socks.

Turf scubber is the APIS-60 four squares scrubber. Get a good amount of big green stuff every month.

Just afraid of nitrates of phosphate bottoming out cause last time I had heavy dinos breakout. It happen in my frag tank too.

Sps heavt tank and corals doing good.
 
I fought this same problem for a long time. Tried all kinds of bacteria additives to no avail. Ultimately, I alternated lights off/on (not total blackout, but my tank is in wall, so it got very little ambient light) for 4 2-day cycles and added 4 lbs of gulf live sand. Was also dosing silicates. It’s pretty much cleared up, and si has been dropping naturally. Some diatoms eating that up.
 
Dino's will go away if you stick with low nutrients.

Many people have heard that reducing nutrients to "zero" (nitrate, phosphate, etc as measured by hobby test kits) is not good for coral growth. The answer is, it depends. "Zero" is not really zero of course; hobby test kits don't need to test super low levels like lab tests do. In other words, there is always a level of nutrients there, even if you have "all zeros".

First thing to know is that natural reefs always test "zero" for nutrients with hobby test kits. Yet, they have very high growth rates; acro's can grow two feet in one year. But yes, some hobbyists do see less growth with zero nutrients. Why is this, and what is different with tanks compared to natural reefs?

One answer is food particles. The enormous amount of visible food particles (and invisible dissolved particles) in natural reefs is so high that at night some divers can't see their own hands. And the enormous level of photosynthesis on reefs consumes most of the resulting nutrients. But hobbyists can't have this level of food particles because of nutrient build up, so they reduce feeding, to as little as 1/1000 of natural reef levels. Thus, corals can starve from lack of food particles.

So one bandaid to help with this is to keep tank nutrients above "zero". This feeds bacteria around the corals, and the bacteria then become coral food. Softies take it in directly, by inflating with water, and polyps eat the microbes and pods that eat the bacteria.

This works but is self-limiting, because in most cases higher levels of phosphate is going to slow the coral growth, and also because bacteria are hard for polyps to grab. So the trick is to keep food particle levels up high, and keep nutrients down low, at the same time. In other words, try to duplicate natural reefs.

Also, some people say they get some brown dust algae (usually dino's) when nutrients go to zero. However this is temporary, because of phosphate leaving the sand and rocks. After a few weeks, this will go away.
 
Also, some people say they get some brown dust algae (usually dino's) when nutrients go to zero. However this is temporary, because of phosphate leaving the sand and rocks. After a few weeks, this will go away.
I agree with almost everything you said, but after experimenting for 6+ years with a tank in the ultra low nutrient range, I wouldn't say the brown stains on the substrate are temporary, because you can absolutely sustain them for months or even years. It can sometimes also be stopped by dosing nutrients and then started again by stopping the dosage. When it looks like dust rather than slime it's more likely to be diatoms (there are exceptions) and those stains are indeed temporary, but dinoflagellates can definitely stay "indefinitely".

Not all tanks get rid of dinoflagellates by dosing nutrients, and you can obviously make things even worse that way, but sometimes it actually works. For Symbiodinium and related coral symbionts we already have scientific data explaining how adding nitrogen can actually "starve" dinoflagellates:
elevated nitrogen levels make them divide faster, so if phosphate is kept reasonably low, they reproduce too quickly and then run short of the phosphate they need (see Rosset et al., 2017 & Nalley et al., 2023). I could imagine the same applies to the benthic dinoflagellates causing issues in our tanks, and maybe a comparable limitation happens with carbon and trace elements when both nitrogen and phosphorus are provided in higher concentrations. That might explain why people started associating zero readings with dinoflagellates, even though it doesn't really seem to make sense from a pure nutrient-availability perspective.
 
Did the reefmat cause i hate filter socks.
Like I said filtration like that should be unnecessary in a reef under good conditions....does the reef mat seem necessary, as in does it pull out tons of crap? Usually everything a mechanical filter pulls out is what we'd normally consider coral food. (In a fish tank it's all just "waste" to be filtered out....this is what roller mats and socks are really for.)

Wondering if there's something going on in your system that makes it really necessary if it's something you could decomission and your system might benefit from not having it.

Turf scubber is the APIS-60 four squares scrubber. Get a good amount of big green stuff every month.
I assume that's a good thing, right?

Just afraid of nitrates of phosphate bottoming out cause last time I had heavy dinos breakout. It happen in my frag tank too.
I would definitely decomission excessive filtration if you're worried about zeroing out your tank.....doesn't makes sense to worry AND ALSO run double extra filtration. Back off on the filtration down to regular reef level IMO and see how it goes. Live rock and a protein skimmer ought to be enough.

Sps heavt tank and corals doing good.
Sounds good.

What do you have for flow in this tank and how does the skimmer seem? Any trouble skimming? Extra stinky? Too dry? Too wet? Anything interesting?
 
That might explain why people started associating zero readings with dinoflagellates, even though it doesn't really seem to make sense from a pure nutrient-availability perspective.
It makes sense, it's just not linear cause-effect.

If you read the journal docs on my dino thread from 2017 they explain this. If anyone is interested, look first at the articles that mention "bacterivory" and "putting N in dinoflagellates" in the titles.....read the rest of the articles I listed there too. 👍

In a nutshell, dino's easily starve for N&P (which they are not adept at uptake) and it's like flipping a switch when it happens....they go from autotroph to phagotroph and instead of using dissolved nutrients and photosynthesis, they begin consuming bacteria for nutrients. There is LOTS of bacteria to consume.

Then the dino population does what populations do when they become replete with nutrients....the population explodes. What we refer to as a dino-outbreak.

That's how it starts.

As the dino bloom progesses, the dead cells accumulate in the system and bacteria start going to work on them to break them down.....from memory their exoskeletons (theca) have something like a 5000:1 carbon ratio, so it takes CRAPLOADS of N&P to make this decomposition happen.

This is why the system seems "glued to zero" when folks first start trying to dose their way out of the situation.....it takes a tremendous amount of N&P to get over that "carbon hump" of the dino bloom's dead cells.

Only after that will there be available dissolved nutrients sufficient to grow anything more significant than bacteria.

There is a similar story for Symbiodinium dino's, but they have the benefit of the coral to balance out (within limits) the nutrient situation for them. The second article mentioned addresses them more directly.
 
It makes sense, it's just not linear cause-effect.

If you read the journal docs on my dino thread from 2017 they explain this. If anyone is interested, look first at the articles that mention "bacterivory" and "putting N in dinoflagellates" in the titles.....read the rest of the articles I listed there too. 👍

In a nutshell, dino's easily starve for N&P (which they are not adept at uptake) and it's like flipping a switch when it happens....they go from autotroph to phagotroph and instead of using dissolved nutrients and photosynthesis, they begin consuming bacteria for nutrients. There is LOTS of bacteria to consume.

I'm familiar with those threads and appreciate the pointers. There are just a few points I'd like to understand better before applying them to reef tanks.

For example, the idea that dinoflagellates are not adept at N & P uptake is something I'd like to look at more closely, since "[...] A. carterae is recognized as one of the microalgae species with the
most efficient mechanisms for nitrogen uptake (Lavín and Lourenço, 2005)".
I also recall that some dinoflagellates have developed specialized uptake mechanisms to assimilate N or P (I don't remember which one it was) when other organisms no longer could.

Athecate dinos like Amphidinium would also not leave hard to digest thecae behind, and even at 0.1ppm NO3, which is below the detection limit of the LR HannaChecker, we are still an order of magnitude above fairly normal coral reef conditions, so nitrogen starvation seems unlikely to me if not for the ratio effects between essential elements/nutrients I mentioned earlier. That's what I meant by "it doesn't seem to make sense", even though there is clearly an explanation for the phenomenon.

I have no doubt that dinoflagellates prefer mixotrophic feeding when they get the chance. I'm just not sure I'd point to bacteria decomposing their exoskeleton as the reason for nutrients being "glued to zero", since the dinoflagellates themselves may be consuming quite a lot and are also known to be capable of luxury uptake which makes this even worse.

I hope you see where I'm coming from and why I wasn't able to put the mentioned threads into my earlier response. Very very interesting topic! Absolutely fascinating creatures.
 
For example, the idea that dinoflagellates are not adept at N & P uptake is something I'd like to look at more closely, since "[...] A. carterae is recognized as one of the microalgae species with the
most efficient mechanisms for nitrogen uptake (Lavín and Lourenço, 2005)".
I also recall that some dinoflagellates have developed specialized uptake mechanisms to assimilate N or P (I don't remember which one it was) when other organisms no longer could.
I think you are forgetting the competion at this stage is not with coral, it's with the bacteria (ie dino's vs bacteria)...and bacteria will run nutrient levels down to where nothing else can compete. (It's in the articles.)

Dino's are special tho, you aren't barking up the wrong tree! Most everything else photosynthetic generally just gives up and dies in this scenario (you can see how some of those tanks look.....nothing but cyano and dino's left). Dino's are some of the ultimate survivors IMO.

All I can say is finish the reading...all of those points are addressed. There's further reading all around the topic on my blog (more jounal links) if you go there to the dino section....but you might have to be "a little too into it" like us to go there I think. ;)

You'll have to trust me I'm not making any of this up, it comes from primary sources and all of it has been widely verified "clinically" here with us.

Now, if you're trying to wonder if the advice is perfect or whether applies to all scenarios or all dino's, the answer is no. That's why there's a thread and not just a book or article or some simple advice. (Though some folks have tried to summarize it that way.)

I don't agree that the information is as useful summarized in any of those ways because (as we acknowledge all the time very consciously) there are limits to the understanding we have and the situations to which our understanding applies.

You can see the breakdown of this in the first post....if your tank doesn't meet those criteria, you don't have a dino outbreak so far as the thread is concerned. You may have some dino's....but not an outbreak that fits the context that we fairly understand. And you don't get the treatment from the thread without going through the "entrance exam" to see if your tank even qualifies for it.

It may help make more sense of things to read through the first several pages of the thread coments to see the manner in which folks actually got help for actual tanks with actual dino outbreaks. You can see a smattering of people getting rejected as well when they did not have dino outbreaks...that might also be useful to see how it happened.

To your point (I think) ostreopsis is another one of the many edge cases that "treatments" we have don't work well on.

Read some of the material we have on them and you see there are definitely things one could try....they are triggered by the same seasonal nutrient shifts in their environment as other dino's, just differently. It's just that the things to try are a bit more extreme than most would be willing to experiment with....not just "goosing" N & P.

Anyway, there are LOTS of dino's....you can read in the thread which dino's are to be targeted in the manner the thread describes AND the symptoms the tank more or less has to have are pretty well described.

The other situations and the many other types of dino's don't fit the formula. As you can see in the thread, and as mentioned, amphidinium are one of the edge cases.

We've got a clue about how to deal 5 or 10 of them, tops. :)

That's also why changing the attitude of the dino in question (back to autotroph) is only half of the "treatment".

The other half is getting the reef to grow – hence the activated carbon, added nutrients, et al.....dino's don't behave this way in a healthy reef.

I'm just not sure I'd point to bacteria decomposing their exoskeleton as the reason for nutrients being "glued to zero", since the dinoflagellates themselves may be consuming quite a lot and are also known to be capable of luxury uptake which makes this even worse.
Arguably that's part of the plan, though I don't recall any research specifically suggesting it. Like I said the idea for the dino's is to change their attitude back to autotrophism......maybe "luxury uptake" is what's happening during "treatment".

This would be a a good theoretical discussion in the dino thread, BTW, which I would encourage. It's interesting, but a bit throwaway to go deep here on a cyano thread for one tank.

If you'd like to (here or there), please be more specific about the dino's you're referring to re:luxury uptake and please share a pointer to any article(s) you have that describe luxury uptake in this context. 👍

I'd also wonder if you have any article(s) you may be basing a calculation for the amount of N & P required to break down one dino theca. Also curious if you have any resource that suggest how many dino cells are generated during a heavy bloom? Last, if you have a resource that suggests how much n & p might be "lost" to luxury uptake to one dino cell?

For example, the idea that dinoflagellates are not adept at N & P uptake is something I'd like to look at more closely, since "[...] A. carterae is recognized as one of the microalgae species with the
most efficient mechanisms for nitrogen uptake (Lavín and Lourenço, 2005)".
It was a generaization about the dino's in the thread and a comparison with other pest algae we deal with. Reading the rest of the thread resources would help.....the info on my thread was designed to be read altogether, not taken in pieces like this.

...which I kinda say on the thread too.

Your link is interesting, but the reported results are not purely how you've summarized them with amphidinium being excellent at uptake...which this article doesn't actually come out and say – it's actually a citation of another article. Reported results in this article were actually uneven and depended on the culture medium in some interesting ways.

Is it weird that they are culturing a HAB-algae in the context of a food production operation and not once mentioning toxins but instead talking about other "valuable assets" dino's might produce?? Very imaginative, but...how is it not even on their radar?

Also very imaginative thinking in the article about brine remediation....like plants aren't 60-70% water when the leave the system. All that water has to be made up with more scarce freshwater to return the brine to seawater levels...can't use seawater to dilute something down to seawater. ;)
 
@mcarroll

Maybe we are misunderstanding each other.
I'm just saying dinoflagellates do fine with dissolved N & P uptake, not that they outperform bacteria at it. They don't really have to care that much about outcompeting them, they can just eat them as long as enough are available. 😁

You said it yourself very well: The threads and blog posts have to be seen as a whole and a generalization is very difficult. That's why I'm not comfortable claiming something like "phagotrophic feeding is the culprit". Blackouts and bacteria dosing could potentially cause extreme blooms otherwise. I'm not saying either of those methods is a good/bad treatment, but they would backfire pretty hard if phagotrophic feeding was the core issue. So I'm not saying there is no way it's an important factor for the treatment, I'm just very careful about how much weight I give it.

I've seen a few blog posts including the one mentioning the high C:N:P ratio of dinoflagellate thecae. But if they were the main reason for nutrient levels being locked at "zero", you could start selling isolated thecae as a solution for high nutrient levels 😅 Or to make it simpler: Just put biodegradable cellulose into a tank. A C:N:P ratio of C:0:0 should simulate thecae close enough, or might even work better. We know that carbon dosing affects N & P, but I don't think that shows the whole picture. Hobby-grade test kits have very bad detection limits, so dinoflagellates will be able to take up dissolved nutrients long before the tests show anything. In other words: The uptake of the dinoflagellates themselves might play a major role here as well. I don't think narrowing it down to bacteria trying to break down thecae is the solution, especially when we observe the same phenomenon of "locked" nutrients with athecate dinoflagellates.

To summarize (and not fully hijack this thread): I'm not saying anything you said is wrong, I'm just trying to be careful about absolutes or narrowing complex issues down to a few factors. My forum signature says it best: "Precision isn't obsession - it's respect for complexity."... but to be fair... maybe it's also a bit of obsession... 🤣

go there to the dino section....but you might have to be "a little too into it" like us to go there I think. ;)
You might have found the right guy 😅

Is it weird that they are culturing a HAB-algae in the context of a food production operation and not once mentioning toxins but instead talking about other "valuable assets" dino's might produce?? Very imaginative, but...how is it not even on their radar?
Some of the produced toxins fall under Schedule I and chemical/biological weapons iirc, so in that sense... these really are "valuable assets" 🤣
 

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