Sorry, but that is a disaster waiting to happen. The return outlet may be pretty close to the water's surface but unless it is completely out of the water, it will siphon back too much water. The piping will drain also. Take *fish collector* 's advice, look at the water levels in the picture he posted, try to mimic that. Pick a skimmer, read its water level requirements (normally 6-8") and use that for the 1st chamber's water level and go down from there. The chamber with the return pump should be the shallowest section, just high enough that the pump doesn't suck in air as it runs. The ato goes is return pump chamber, at that water level.
At the very least, move that ato float valve down about 10 inches. (Remove the excess water, don't just let it evaporate- that will raise salinity)