I am making this post this evening before the microbiota of my systems change forever tomorrow. This will act as a break between 2 biomes, showing and documenting progress now before adding Ocean Direct sand to a nano tomorrow and the tote continuing to cycle in the dark. Interesting things have happened.....
This method is a modified version of BRS Ryans 4 month cycle (video below)
Elements of this post use AI to express the process, this will be abundantly clear (in a quote box), if you have issues with my vernacular remember i'm british, we have vocabulary; i borrowed trumps thesaurus, we got the best words.
On the 07/07/25 i started cycling my main DT aquascape - Reef crystals, heater, pump. Dosed Dr Tims as per directions (incl ammonia) for the first dose, i delineate (see good words) here from Dr tims instructions, when nitrites show, i re dose One and only (only, no ammonia), the reason for this is we now have our AOB (ammonia oxidising bacteria) established and producing nitrites, it is oft proffered that NOB (nitrite oxidising bacteria) are slow to develop, but this isnt true, the environs for their success develop later; by dosing again, fresh NOB hit the ground running in a nitrite rich buffet. This allows a level of equlibrium between AOB and NOB. Once fully cycling, ammonia dosing continues.
I know a lot will be thinking 'yeah and...'
So once it was cycling i added some media to seed for QT and added a fluval 307 to also seed.. So totes cycling, doing it's thing i end up with another fluval evo (so 2 x evos, 2x 300l cubes and some petco type thing), i decided to use one as an LPS growout, reseeded (using my frozen biome ;p) a couple of weeks ago i added a small piece of my big aquascape to the nano, left it cycling (dosing ammonia) on 6th October (3 months later....) i was inspecting the chambers on the nano with a torch, and an unusual hue caught my eye - pink. The rubber feet on the pump had a pink something on it. Could it be coralline? Surely not, but yep it is. So i went to check the tote - the return of the fluval has pink spots on it, try to wipe it off , doesnt shift.... CORALLINE!! Looked in nano return chamber today and its developed on the pump cable..... this tank is about 3-4 weeks old (just checked, 12th september) ... all new, never had ANYTHING in it.....tote is the same, all new never seen a fish, a coral or anything.
The coralline on that fluval fitting in the tote is quite different to the nano coralline in the following picture, note the calcification of the cable (sorry for the muted colours, will get the big camera out tomorrow, it's much much clearer in person.
Remember, this nano is less than a month old. It's not slimy, its crusty :D
I'll post some updates in the future marking progress and divergence and some clearer footage tomorrow.
This method is a modified version of BRS Ryans 4 month cycle (video below)
Elements of this post use AI to express the process, this will be abundantly clear (in a quote box), if you have issues with my vernacular remember i'm british, we have vocabulary; i borrowed trumps thesaurus, we got the best words.
On the 07/07/25 i started cycling my main DT aquascape - Reef crystals, heater, pump. Dosed Dr Tims as per directions (incl ammonia) for the first dose, i delineate (see good words) here from Dr tims instructions, when nitrites show, i re dose One and only (only, no ammonia), the reason for this is we now have our AOB (ammonia oxidising bacteria) established and producing nitrites, it is oft proffered that NOB (nitrite oxidising bacteria) are slow to develop, but this isnt true, the environs for their success develop later; by dosing again, fresh NOB hit the ground running in a nitrite rich buffet. This allows a level of equlibrium between AOB and NOB. Once fully cycling, ammonia dosing continues.
I know a lot will be thinking 'yeah and...'
So once it was cycling i added some media to seed for QT and added a fluval 307 to also seed.. So totes cycling, doing it's thing i end up with another fluval evo (so 2 x evos, 2x 300l cubes and some petco type thing), i decided to use one as an LPS growout, reseeded (using my frozen biome ;p) a couple of weeks ago i added a small piece of my big aquascape to the nano, left it cycling (dosing ammonia) on 6th October (3 months later....) i was inspecting the chambers on the nano with a torch, and an unusual hue caught my eye - pink. The rubber feet on the pump had a pink something on it. Could it be coralline? Surely not, but yep it is. So i went to check the tote - the return of the fluval has pink spots on it, try to wipe it off , doesnt shift.... CORALLINE!! Looked in nano return chamber today and its developed on the pump cable..... this tank is about 3-4 weeks old (just checked, 12th september) ... all new, never had ANYTHING in it.....tote is the same, all new never seen a fish, a coral or anything.
The coralline on that fluval fitting in the tote is quite different to the nano coralline in the following picture, note the calcification of the cable (sorry for the muted colours, will get the big camera out tomorrow, it's much much clearer in person.
Remember, this nano is less than a month old. It's not slimy, its crusty :D
1. The microbial succession
AOB and NOB (ammonia- and nitrite-oxidising bacteria) are autotrophs.
They get carbon from CO₂, not from waste. Their metabolism releases acid, but the high-alkalinity Reef Crystals mix and constant aeration kept pH around 8.3.
Because there were no sugars or light-fed organics, heterotrophic bacteria never bloomed.
The film that formed on the rock was almost entirely nitrifier EPS — thin, porous, and alkaline instead of thick and slimy.
That surface chemistry matters: calcium and carbonate ions can move through it freely.
2. The chemistry that built the primer
Reef Crystals starts rich:
- Alk ≈ 12 dKH fresh
- Ca ≈ 440–460 ppm
- Mg ≈ 1400 ppm
- Strong borate buffering
With heavy aeration pulling CO₂ out, the system’s aragonite saturation state (Ωₐᵣₐg) stayed well above 1.
Inside the bacterial film, local pH ran even higher (8.5+).
That combination makes micro-crystals of CaCO₃ precipitate within the film itself, locking it to the surface — a microscopic carbonate “primer coat.”
It’s chemically the same base layer coralline algae later build on.
3. Why the dark phase helped
No light meant:
- no diatoms or film algae to compete for real estate,
- no DOC from photosynthetic exudates,
- no organic acids lowering local pH.
So the first organisms to occupy the rock were nitrifiers, not phototrophs.
By the time any light arrived, the surfaces were already mineralised and mildly alkaline — not the soft, nutrient-rich biofilm that fuels “the uglies.”
4. Coralline colonisation
Coralline spores are everywhere: in air, salt dust, equipment.
They can attach to clean carbonate even in darkness, using stored energy to maintain basic metabolism.
Once exposed to light, their photosystems wake up, chlorophyll and phycoerythrin are expressed, and the crust turns pink-purple.
That’s why the first visible patches appeared on plastics and pump cables — clean, high-flow surfaces with the same carbonate primer.
The rocks followed once they had light exposure.
5. What’s gained
- Fast biochemical maturity: complete nitrification, stable pH, no nitrite stalls.
- Clean surfaces: mineralised, not mucous; coralline settles before nuisance algae.
- Stable chemistry: RC’s high alk and borate buffer absorb the acid load from nitrification.
- Reproducible: every tote cycle becomes a low-risk way to prep pest-free, coralline-ready rock.
6. Condensed chain of events
NH₃ → NO₂⁻ → NO₃⁻ (nitrification)
CO₂ removed → pH ↑ → [CO₃²⁻] ↑
Ca²⁺ + CO₃²⁻ → CaCO₃(s) within nitrifier EPS
→ mineralised surface
→ coralline attachment → pigment on illumination
I'll post some updates in the future marking progress and divergence and some clearer footage tomorrow.

