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Thank you! I definitely think Amphidinium is possible, just not sure if it is small cell or large cell. I do notice the stains get slightly lighter at night but not completely gone. If it goes deeper in the substrate what would you recommend as a best course of action?I would say Amphidinium.
Compare to images from the identification guide
https://www.reef2reef.com/attachments/dinoflagellateid12_12_2019-pdf.1324729/
Or to images in my microscopy thread:
https://www.reef2reef.com/threads/microscopy-thread.1138845/
Post #3 is a small cell Amphidinium. Post #5 large cell Amphidinium from another user. Post #1 contains prorocentrum and ostreopsis. Don't get confused by the "3D" look in my images. I'm using a different illuminaton technique to get better images than typical bright-field microscopy.
Remember that Amphidinium is a whole genera with many different species. Your individuals might look slightly different, but still have this "beak" which is most often associated with Amphidinium. Without DNA analysis an exact identification is impossible.
What matters is the behavior at night when lights turn off. If the stains get smaller they either go into the open water column (best case), or deeper into the substrate (worst case).
Definitely dinos. I’ll let someone else chime in on specific ID
Yeah you’re right unfortunatelyDefinitely dinos. I’ll let someone else chime in on specific ID.

Depends on the tank. If the tank is only a few months old, doing nothing can be absolutely fine. Very often dinos will sort themselves out.Thank you! I definitely think Amphidinium is possible, just not sure if it is small cell or large cell. I do notice the stains get slightly lighter at night but not completely gone. If it goes deeper in the substrate what would you recommend as a best course of action?I would say Amphidinium.
Compare to images from the identification guide
https://www.reef2reef.com/attachments/dinoflagellateid12_12_2019-pdf.1324729/
Or to images in my microscopy thread:
https://www.reef2reef.com/threads/microscopy-thread.1138845/
Post #3 is a small cell Amphidinium. Post #5 large cell Amphidinium from another user. Post #1 contains prorocentrum and ostreopsis. Don't get confused by the "3D" look in my images. I'm using a different illuminaton technique to get better images than typical bright-field microscopy.
Remember that Amphidinium is a whole genera with many different species. Your individuals might look slightly different, but still have this "beak" which is most often associated with Amphidinium. Without DNA analysis an exact identification is impossible.
What matters is the behavior at night when lights turn off. If the stains get smaller they either go into the open water column (best case), or deeper into the substrate (worst case).