One thing you can do to get more depth of field (to get more of the subject in focus) is to adjust the aperture to a high number. This shrinks the lens opening which reduces the amount of light entering so it requires a longer exposure, but it will allow you to get this whole coral in focus. The longer exposure will require a tripod to keep the camera steady, and you might need to turn off the flow pumps so the polyps aren't moving, but the results can be worth it.
Here's an example shot at f/36 with a 3 second exposure. Notice the front and back of the coral are both in focus: