Also, it's important to remember that a host of things happen, when a system is running less than 100%. If you have a high fish load, then CO2 build-up can happen quickly, even when using a simple battery powered air pump. Without carbon, protein skimming, mechanical filtration, reactors, etc - fish waste can become trapped in the system, overwhelming the bacteria population that normally operates with reduced levels of waste. Anaerobic bacteria that is kept alive in slow flowing areas, like a refugium or reactor, starts to die-off along with aerobic bacteria. Without lights, photosynthesis cannot take place, lowering ph and allowing for greater carbon build-up. While after an outage, where battery powered air pumps are primarily used, the tank may appear okay - it's likely that long-term damage has been done.
