Thanks @Subsea
From what I've read it's not the ammonia form of nitrogen that's the issue it nitrates. Shantz and Burkpile have looked at nitrogen (one paper reviewed the data from 44 different published studies) and it was nitrates that caused the most issues wiht corals, not ammonia. A quote from one of their papers I think points out the complexity we are dealing with:
"the response of corals to increasing nutrient availability was context dependent, varying with coral taxa and morphology, enrichment source, and nutrient identity"
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Nitrogen Identity Drives Differential Impacts of Nutrients on Coral Bleaching and Mortality - Ecosystems
Nitrogen pollution increases the susceptibility of corals to heat-induced bleaching. However, different forms of nitrogen (nitrate vs. ammonium/urea) may have different impacts on thermal tolerance of corals. We used an 18-month field experiment on the oligotrophic fore reef of Moorea, French...link.springer.com
Adding labile DOC, aka carbon dosing, does promote heterotrophic bacterial growth. There's lots of research demonstrating that. Unfortunately, ta major difference between coral DOC and algal DOC is coral DOC is largely refractory and promotes autotrophic microbial processes (read oxygen conserving) while algal DOC is largely labile and promotes heterotrophic microbial processes (read oxygen consuming. Adding labile DOC to promote heterotrophic microbial prcesses can have an immidiate or acute effect on corals. It can promote heterotrophic microbial growth in corals microbiomes and can literally suffocate corals as heterotrophic bacteria suck up oxygen using labile DOC to consume the refractory DOC available. Excess labile DOC can also have chronic effects on corals taking years to have obvious negative effects on corals (Old Tank Syndrome)
As Subsea pointed out, sponges are a variable. A huge variable as it turns out depending on how a species feeds. Some feed exclusively off DOC and remove it 1000X faster than the bacterioplankton in a system. While they may mitigate the negative effects on labile DOC in a system they do process DOC differentially depending on it's source. DOC from corals results in different compounds than DOC from algae. We don't know yet how artificial sources of labile DOC effect microbial prcesses but considering the mountain of peer reviewed research showing labile DOC causes coral death I'd wouldn't use it.
Here's a data bomb
Nitrogen stuff
Nitrogen cycling in hte coral holobiont
Ammonium Uptake by Symbiotic and Aposymbiotic Reef Corals
Ammonium Uptake by Symbiotic and Aposymbiotic Reef Corals: Ingenta Connect
www.ingentaconnect.com
Amino acids a source of nitrogen for corals
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Uptake of dissolved free amino acids by the scleractinian coral Stylophora pistillata
SUMMARY. This study was designed to assess the importance of dissolved free amino acids (DFAA) as a nitrogen source for the scleractinian coral Stylophora pistillata. For this purpose, experiments were performed using 15N-enriched DFAAs, and %15N enrichment was measured both in animal tissue and...journals.biologists.com
Urea a source of nitrogen for corals
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Urea uptake by the scleractinian coral Stylophora pistillata
Urea can be one of the major sources of nitrogen for phytoplankton, but little is known about its importance for corals. Experiments were therefore de…www.sciencedirect.com
Diazotrpophs a source of nitrogen for corals
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Diazotrophs: a non-negligible source of nitrogen for the tropical coral Stylophora pistillata - PubMed
Corals are mixotrophs: they are able to fix inorganic carbon through the activity of their symbiotic dinoflagellates and to gain nitrogen from predation on plankton and uptake of dissolved organic and inorganic nutrients. They also live in close association with diverse diazotrophic communities...pubmed.ncbi.nlm.nih.gov
Ammonia uptake by Anemones
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Nutrient transfer in a marine mutualism: patterns of ammonia excretion by anemonefish and uptake by giant sea anemones - Marine Biology
Many symbioses involve multiple partners in complex, multi-level associations, yet little is known concerning patterns of nutrient transfer in multi-level marine mutualisms. We used the anemonefish symbiosis as a model system to create a balance sheet for nitrogen production and transfer within...link.springer.com
Elevated ammonium delays the impairment of the coral-diniflagellate symbiosis during labile carbon pollution
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Elevated ammonium delays the impairment of the coral-dinoflagellate symbiosis during labile carbon pollution
Labile dissolved organic carbon (DOC) is a major pollutant in coastal marine environments affected by anthropogenic impacts, and may significantly con…www.sciencedirect.com
DOC Stuff
"Coral Reefs in the Microbial Seas" This video compliments Rohwer's book of the same title (Paper back is ~$20, Kindle is ~$10), both deal with the conflicting roles of the different types of DOC in reef ecosystems. While there is overlap bewteen his book and the video both have information not covered by the other and together give a broader view of the complex relationships found in reef ecosystems
Maintenance of Coral Reef Health (refferences at the end)
Global microbialization of coral reefs (Increased microbial loads negatively impact coral reefs)
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Global microbialization of coral reefs - Nature Microbiology
Analysis of 60 sites in three ocean basins suggests that overgrowth of fleshy algae on coral reefs supports higher microbial abundances dominated by copiotrophic, potentially pathogenic bacteria via the provision of dissolved inorganic carbon.www.nature.com
Indirect effects of algae on coral: algae‐mediated, microbe‐induced coral mortality
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onlinelibrary.wiley.com
Influence of coral and algal exudates on microbially mediated reef metabolism.
Coral DOC improves oxygen (autotrophy), algae DOC reduces oxygen (heterotrophy).
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Influence of coral and algal exudates on microbially mediated reef metabolism
Benthic primary producers in tropical reef ecosystems can alter biogeochemical cycling and microbial processes in the surrounding seawater. In order to quantify these influences, we measured rates of photosynthesis, respiration, and dissolved organic carbon (DOC) exudate release by the dominant...peerj.com
Role of elevated organic carbon levels and microbial activity in coral mortality
Effects of Coral Reef Benthic Primary Producers on Dissolved Organic Carbon and Microbial Activity
Algae releases significantly more DOC into the water than coral.
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Effects of Coral Reef Benthic Primary Producers on Dissolved Organic Carbon and Microbial Activity
Benthic primary producers in marine ecosystems may significantly alter biogeochemical cycling and microbial processes in their surrounding environment. To examine these interactions, we studied dissolved organic matter release by dominant benthic taxa and subsequent microbial remineralization in...journals.plos.org
Pathologies and mortality rates caused by organic carbon and nutrient stressors in three Caribbean coral species.
DOC caused coral death but not high nitrates, phosphates or ammonium.
Visualization of oxygen distribution patterns caused by coral and algae
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Visualization of oxygen distribution patterns caused by coral and algae
Planar optodes were used to visualize oxygen distribution patterns associated with a coral reef associated green algae (Chaetomorpha sp.) and a hermatypic coral (Favia sp.) separately, as standalone organisms, and placed in close proximity mimicking coral-algal interactions. Oxygen patterns were...peerj.com
Biological oxygen demand optode analysis of coral reef-associated microbial communities exposed to algal exudates
Exposure to exudates derived from turf algae stimulated higher oxygen drawdown by the coral-associated bacteria.
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Biological oxygen demand optode analysis of coral reef-associated microbial communities exposed to algal exudates
Algae-derived dissolved organic matter has been hypothesized to induce mortality of reef building corals. One proposed killing mechanism is a zone of hypoxia created by rapidly growing microbes. To investigate this hypothesis, biological oxygen demand ...www.ncbi.nlm.nih.gov
Microbial ecology: Algae feed a shift on coral reefs
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Microbial ecology: Algae feed a shift on coral reefs - Nature Microbiology
Human pressures on coral reefs are giving macroalgae a competitive advantage over reef-building corals. These algae support larger, and potentially pathogenic, microbial populations that are metabolically primed for less-efficient, yet faster, carbohydrate remineralization, perpetuating a...www.nature.com
Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages.
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Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages - PubMed
Increasing algal cover on tropical reefs worldwide may be maintained through feedbacks whereby algae outcompete coral by altering microbial activity. We hypothesized that algae and coral release compositionally distinct exudates that differentially alter bacterioplankton growth and community...www.ncbi.nlm.nih.gov
Sugar enrichment provides evidence for a role of nitrogen fixation in coral bleaching
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onlinelibrary.wiley.com
Elevated ammonium delays the impairment of the coral-dinoflagellate symbiosis during labile carbon pollution
(here's an argument for maintaining heavy fish loads if you're carbon dosing)
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Elevated ammonium delays the impairment of the coral-dinoflagellate symbiosis during labile carbon pollution
Labile dissolved organic carbon (DOC) is a major pollutant in coastal marine environments affected by anthropogenic impacts, and may significantly con…www.sciencedirect.com
Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton
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Excess labile carbon promotes the expression of virulence factors in coral reef bacterioplankton - The ISME Journal
Coastal pollution and algal cover are increasing on many coral reefs, resulting in higher dissolved organic carbon (DOC) concentrations. High DOC concentrations strongly affect microbial activity in reef waters and select for copiotrophic, often potentially virulent microbial populations. High...www.nature.com
Unseen players shape benthic competition on coral reefs.
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Unseen players shape benthic competition on coral reefs - PubMed
Recent work has shown that hydrophilic and hydrophobic organic matter (OM) from algae disrupts the function of the coral holobiont and promotes the invasion of opportunistic pathogens, leading to coral morbidity and mortality. Here we refer to these dynamics as the (3)DAM [dissolved organic...www.ncbi.nlm.nih.gov
Allelochemicals (DOC) Produced by Brown Macroalgae of the Lobophora Genus Are Active against Coral Larvae and Associated Bacteria, Supporting Pathogenic Shifts to Vibrio Dominance.
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Allelochemicals Produced by Brown Macroalgae of the Lobophora Genus Are Active against Coral Larvae and Associated Bacteria, Supporting Pathogenic Shifts to Vibrio Dominance - PubMed
Diverse microbial communities associate with coral tissues and mucus, providing important protective and nutritional services, but once disturbed, the microbial equilibrium may shift from a beneficial state to one that is detrimental or pathogenic. Macroalgae (e.g., seaweeds) can physically and...www.ncbi.nlm.nih.gov
Macroalgae decrease growth and alter microbial community structure of the reef-building coral, Porites astreoides.
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Macroalgae decrease growth and alter microbial community structure of the reef-building coral, Porites astreoides - PubMed
With the continued and unprecedented decline of coral reefs worldwide, evaluating the factors that contribute to coral demise is of critical importance. As coral cover declines, macroalgae are becoming more common on tropical reefs. Interactions between these macroalgae and corals may alter the...www.ncbi.nlm.nih.gov
Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals.
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Macroalgal extracts induce bacterial assemblage shifts and sublethal tissue stress in Caribbean corals - PubMed
Benthic macroalgae can be abundant on present-day coral reefs, especially where rates of herbivory are low and/or dissolved nutrients are high. This study investigated the impact of macroalgal extracts on both coral-associated bacterial assemblages and sublethal stress response of corals. Crude...www.ncbi.nlm.nih.gov
Biophysical and physiological processes causing oxygen loss from coral reefs.
Sponge Stuff
BActeria and Sponges
Element cycling on tropical coral reefs.
This is Jasper de Geoij's ground breaking research on reef sponge finding some species process labile DOC 1000X faster than bacterioplankton. (The introduction is in Dutch but the content is in English.)
Sponge symbionts and the marine P cycle
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Sponge symbionts and the marine P cycle
Marine sponges are ubiquitous colonizers of shallow, clear-water environments in the oceans (1, 2). Sponges have emerged as significant mediators of biogeochemical fluxes in coastal zones by virtue of respiring organic matter and facilitating both the consumption and release of nutrients (3, 4)...www.pnas.org
Phosphorus sequestration in the form of polyphosphate by microbial symbionts in marine sponges
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Phosphorus sequestration in the form of polyphosphate by microbial symbionts in marine sponges
Coral reefs are highly productive ecosystems that raise a conundrum called “Darwin’s paradox”: How can high production flourish in low-nutrient conditions? We show here that in three abundant Caribbean sponges, the granules that have been commonly observed in sponge tissue for decades are...www.pnas.org
Differential recycling of coral and algal dissolved organic matter via the sponge loop.
Sponges treat DOC from algae differently than DOC from corals
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besjournals.onlinelibrary.wiley.com
A Vicious Circle? Altered Carbon and Nutrient Cycling May Explain the Low Resilience of Caribbean Coral Reefs
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A Vicious Circle? Altered Carbon and Nutrient Cycling May Explain the Low Resilience of Caribbean Coral Reefs
Coral reefs are economically important ecosystems that have suffered unprecedented losses of corals in the recent past. Why have Caribbean reefs in particuacademic.oup.com
Surviving in a Marine Desert The Sponge Loop Retains Resources Within Coral Reefs
Dissolved organic carbon and nitrogen are quickly processed by sponges and released back into the reef food web in hours as carbon and nitrogen rich detritus.
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(PDF) 2013 deGoeij Science Sponge loop
PDF | On Jun 23, 2015, Jasper M de Goeij and others published 2013 deGoeij Science Sponge loop | Find, read and cite all the research you need on ResearchGatewww.researchgate.net
Natural Diet of Coral-Excavating Sponges Consists Mainly of Dissolved Organic Carbon (DOC)
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Natural Diet of Coral-Excavating Sponges Consists Mainly of Dissolved Organic Carbon (DOC)
Coral-excavating sponges are the most important bioeroders on Caribbean reefs and increase in abundance throughout the region. This increase is commonly attributed to a concomitant increase in food availability due to eutrophication and pollution. We ...www.ncbi.nlm.nih.gov
The Role of Marine Sponges in Carbon and Nitrogen Cycles of COral Reefs and Nearshore Environments.
The role of marine sponges in carbon and nitrogen cycles of coral reef and nearshore environments - ProQuest
Explore millions of resources from scholarly journals, books, newspapers, videos and more, on the ProQuest Platform.search.proquest.com
And since we're discussing favorable and not so favorable bacteria here's a paper looking at how different corals and polyps are influencing the bacteria in the water column.
Aura-biomes are present in the water layer above coral reef benthic macro-organisms
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Aura-biomes are present in the water layer above coral reef benthic macro-organisms - PubMed
As coral reef habitats decline worldwide, some reefs are transitioning from coral- to algal-dominated benthos with the exact cause for this shift remaining elusive. Increases in the abundance of microbes in the water column has been correlated with an increase in coral disease and reduction in...www.ncbi.nlm.nih.gov
Thanks for the data bomb @Timfish! I’ll do my best to read through everything you’ve shared
If you had to summarize your takeaway from all the data, what would it be? What action steps would you recommend to a typical Reefer?